################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 18:15:14 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/A2M_A.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1ayoa.pdb
#   2: 1edya.pdb
#
# Length:        139
# Identity:       84/139 ( 60.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     84/139 ( 60.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           14/139 ( 10.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ayoa.pdb               1  EFPFALEVQTLP--QTCDGPKAH---TSFQISLSVSYIGSRPASNMAIVDVKMVSGFIPL   55
1edya.pdb               1  EAPFTLKVNTLPLNFDKA-----EHHRKFQIHINVSYIGERPNSNMVIVDVKMVSGFIPV   55
                           E PF L V TLP                FQI   VSYIG RP SNM IVDVKMVSGFIP 

1ayoa.pdb              56  KPTVKMLER-SNVSRTEVSNNHVLIYLDKVTNETLTLTFTVLQDIPVRDLKPAIVKVYDY  114
1edya.pdb              56  KPSVKKLQDQSNIQRTEVNTNHVLIYIEKLTNQTMGFSFAVEQDIPVKNLKPAPVKVYDY  115
                           KP VK L   SN  RTEV  NHVLIY  K TN T    F V QDIPV  LKPA VKVYDY

1ayoa.pdb             115  YETDEFAVAEYSAPCS---  130
1edya.pdb             116  YETDEFAIEEYSAPFSSDS  134
                           YETDEFA  EYSAP S   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################