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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:14:22 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Cutinase.html
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#====================================
# Aligned_structures: 2
#   1: 1bs9.pdb
#   2: 1cex.pdb
#
# Length:        244
# Identity:       30/244 ( 12.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     30/244 ( 12.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           84/244 ( 34.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bs9.pdb                1  -------------SCPAIHVFGARETTASPGYG-SSSTVVNGVLSAYP-G-STAEAINYP   44
1cex.pdb                1  RTTRDDLINGNSASCADVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVG-G   59
                                        SC       AR  T     G           SA              

1bs9.pdb               45  ACGGQSSCGGASY-SSS-------VAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIM   96
1cex.pdb               60  ---------AYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALA  110
                                                       I          N  CP       GYSQG    

1bs9.pdb               97  DVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFRAGLSYEVGTCAAGGFDQRP  156
1cex.pdb              111  AASI--------------EDLDSAIRDKIAGTVLFGYTKNL-----------QNR-----  140
                                               L S            G                        

1bs9.pdb              157  AGFSCP--SAAKIKSYCDASDPYCCNGSNAATHQGY-----GSE-YGSQALAFVKSKLG-  207
1cex.pdb              141  --GRIPNYPADRTKVFCNTGDLVCTGSLIVA-----APHLAYGPDARGPAPEFLIEKVRA  193
                                P   A   K  C   D  C      A                  A  F   K   

1bs9.pdb                   ----     
1cex.pdb              194  VRGS  197
                               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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