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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:50:52 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/DHH.html
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#====================================
# Aligned_structures: 3
#   1: 1i74a.pdb
#   2: 1k20a.pdb
#   3: 1k23a.pdb
#
# Length:        189
# Identity:       95/189 ( 50.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    165/189 ( 87.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            7/189 (  3.7%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1i74a.pdb               1  SKILVFGHQNPDSDAIGSS-AYAYLKRQL-GVDAQAVALGNPNEETAFVLDYFGIQAPPV   58
1k20a.pdb               1  SKILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVALGEPNEETAFVLDYFGVAAPRV   60
1k23a.pdb               1  EKILIFGHQNPDTDTICSAIAYADLKNKL-GFNAEPVRLGQVNGETQYALDYFKQESPRL   59
                           sKILvFGHQNPDsDaIgSs AyAyLkr l G daeaVaLG pNeETafvLDYFg  aPrv

1i74a.pdb              59  VKSAQAEGAKQVILTDHNEFQQSIADIREVEVVEVVDHHRVANFETANPLY-RLEPVGSA  117
1k20a.pdb              61  ITSAKAEGAEQVILTDHNEFQQSVADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSA  120
1k23a.pdb              60  VETAAN-EVNGVILVDHNERQQSIKDIEEVQVLEVIDHHRIANFETAEPLYYRAEPVGCT  118
                           v sA a ga qVILtDHNEfQQSiaDI EVeV eVvDHHRvANFETAnPLY RlEPVGsa

1i74a.pdb             118  SSIVYRLYKENGVAIPKEIAGV-LSGLISDTLLLKSPTTHASDPAVAEDLAKIAGVDLQE  176
1k20a.pdb             121  SSIVYRMFKEHSVAVSKEIAGLMLSGLISDTLLLKSPTTHPTDKAIAPELAELAGVNLEE  180
1k23a.pdb             119  ATILNK-YKENNVKIEKEIAGL-LSAIISDSLLFKSPTCTDQDVAAAKELAEIAGVDAEE  176
                           ssIvyr yKEn Vai KEIAGl LSglISDtLLlKSPTth  D A A eLAeiAGVdleE

1i74a.pdb             177  YGLALKAG-  184
1k20a.pdb             181  YGLAMLKAG  189
1k23a.pdb             177  YGLNLKAG-  184
                           YGLalkag 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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