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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Mon Jul 25 15:14:04 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Furin-like.html
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#====================================
# Aligned_structures: 2
#   1: 1igra.pdb
#   2: 1m6ba.pdb
#
# Length:        185
# Identity:       41/185 ( 22.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     41/185 ( 22.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           73/185 ( 39.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1igra.pdb               1  ---DLCPGTMEEKPMCEKTTINNEYN--YRCWT---TNRCQ---KMCPSTCGKRACTE--   47
1m6ba.pdb               1  SCPPCHEV------------------CKGRCWGPGSEDCQTLTKTICAPQCNGHC---FG   39
                                                        RCW              C   C         

1igra.pdb              48  ---NNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPN---------------T   89
1m6ba.pdb              40  PNPN-QCCHDECAGGC-SGPQDTDCFACRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHT   97
                              N  CCH EC G C     DT C ACRH    G CVP CP                 T

1igra.pdb              90  Y-RFEGWRCVDRDFCANILSAESSDS-EGFVIHDGECMQECPSGFIRNG--SQSMYCIPC  145
1m6ba.pdb              98  KYQ-YGGVCVAS-C------------PHNFVVDQTSCVRACPPDKMEVDKNG-LKMCEPC  142
                                G  CV                   FV     C   CP              C PC

1igra.pdb             146  EGPCP  150
1m6ba.pdb             143  GGLCP  147
                            G CP


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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