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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:21:26 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Propep_M14.html
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#====================================
# Aligned_structures: 4
#   1: 1aye.pdb
#   2: 1nsa.pdb
#   3: 1pca.pdb
#   4: 1pyta.pdb
#
# Length:        100
# Identity:       20/100 ( 20.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     51/100 ( 51.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           17/100 ( 17.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1aye.pdb                1  LETFVGDQVLEIVPSNEEQIKNLLQLEAQEHLQLDFWKSP-----TTPGETAHVRVPFVN   55
1nsa.pdb                1  ---FEGEKVFRVNVEDENDISELHELAST--RQIDFWKP-DSVTQIKPHSTVDFRVKAED   54
1pca.pdb                1  KEDFVGHQVLRISVDDEAQVQKVKELEDLEHLQLDFWRGP-----ARPGFPIDVRVPFPS   55
1pyta.pdb               1  KEDFVGHQVLRITAADEAEVQTVKELEDLEHLQLDFWRGP-----GQPGSPIDVRVPFPS   55
                              FvG qVlri   dE       eLe    lQlDFW          Pg   dvRVpf  

1aye.pdb               56  VQAVKVFLESQGIAYSIMIEDVQVLLDKENEEMLFNRRR-   94
1nsa.pdb               55  ILAVEDFLEQNELQYEVLINNLRSVLEAQFDSVS-----R   89
1pca.pdb               56  IQAVKVFLEAHGIRYTIMIEDVQLLLDEEQEQMFASQGR-   94
1pyta.pdb              56  LQAVKVFLEAHGIRYRIMIEDVQSLLDEEQEQMFASQSR-   94
                            qAVkvFLE  gi Y imIedvq lLd e e m       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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