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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:34:42 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/WW.html
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#====================================
# Aligned_structures: 4
#   1: 1e0la.pdb
#   2: 1eg4a.pdb
#   3: 1i5hw.pdb
#   4: 1pina.pdb
#
# Length:         80
# Identity:        0/ 80 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      1/ 80 (  1.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           71/ 80 ( 88.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1e0la.pdb               1  G-ATA-------VSE--------------WTEYKTA------D-G-KTYYYN----NRT-   25
1eg4a.pdb               1  -----PASQHFLST-S-------VQG--PWERAISP------NKV-PYYINH----E-T-   32
1i5hw.pdb               1  -GSPV-----------DSNDLGPLPPG-W-------EERTHTD--GRV----FFINHN-I   33
1pina.pdb               1  ----------------------KLPPGWE-------KRMSRSS--GRV----YYFNHI-T   24
                                                                                       

1e0la.pdb              26  LESTW-EKPQELK-------   37
1eg4a.pdb              33  QTTCW-D-------------   38
1i5hw.pdb              34  KKTQ-WEDPRM-QNVAITG-   50
1pina.pdb              25  NASQ-WERPS---------G   34
                                 e             


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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