################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:10:22 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ghf28.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1bhe.pdb
#   2: 1rmg.pdb
#
# Length:        490
# Identity:       53/490 ( 10.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     53/490 ( 10.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          182/490 ( 37.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bhe.pdb                1  SDSRTVSEPKTPS--------SCTTLKADS---------STATSTIQKALNNCDQGKAVR   43
1rmg.pdb                1  QLSGSVGP-----LTSASTKGATKTCNIL-SYGAVADNSTDVGPAITSAWAACKSGGLVY   54
                             S  V                  T                    I  A   C  G  V 

1bhe.pdb               44  LSAGSTSVFLSGPLSLPSGVSLLIDKGVTLRAVNNAKSFENAPSS-CGVVDKNGKG---C   99
1rmg.pdb               55  IPSG-----NYAL-------------NTWVTLTGGSAT-------AIQLDGIIYRTGTAS   89
                              G                                                        

1bhe.pdb              100  DAFITAVSTTNSGIYG--P-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQI  156
1rmg.pdb               90  GNMIAVTDTTDFELFSSTSKGAVQGFGYVY---------------HAEG-T-YGARILRL  132
                              I    TT          G   G G V                          R    

1bhe.pdb              157  NKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAY  216
1rmg.pdb              133  TDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEG-GLDGIDVW-GSNIWVHD  190
                                F      L   P FH               I         DGID     NI    

1bhe.pdb              217  SNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSET--MGVYNVTVDDLKMNG  274
1rmg.pdb              191  VEVTNKDECVTVKS-----PANNILVESIYCNWSGGCAMGSLGADTDVTDIVYRNVYTWS  245
                                 D  V  K         NI           G   GS      V            

1bhe.pdb              275  TTNGLRIKSDKSAA-GVVNGVRYSNVVMKNVAKPIVIDTVYE--KKE-GSN---------  321
1rmg.pdb              246  SNQMYMIKSNG-G-SGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGD-GVQLNNITV  302
                                 IKS      G V  V   N      A    ID          G           

1bhe.pdb              322  ----------------------VPDWSDITFKDVTSET----KGVVVLNGENAKKPIEVT  355
1rmg.pdb              303  KNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRS---------A  353
                                                      D T  D    T                      

1bhe.pdb              356  MKNVKL----T-----------SDSTWQI-------------------------------  369
1rmg.pdb              354  YGSGY-CLKDSSSHTSYTTTSTVTAAPSGYSATTMAADLATAFGLTASIPIPTIPTSFYP  412
                                                                                       

1bhe.pdb              370  ---KNVNVKK  376
1rmg.pdb              413  GLTPYSALAG  422
                                     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################