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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:37:18 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/inositol_P.html
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#====================================
# Aligned_structures: 3
#   1: 1inp.pdb
#   2: 1qgxa.pdb
#   3: 2hhma.pdb
#
# Length:        492
# Identity:       20/492 (  4.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     83/492 ( 16.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          288/492 ( 58.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1inp.pdb                1  MS---DILQELLRVSEKAANIARACRQQ--------------------ETLFQLL-----   32
1qgxa.pdb               1  --ALERELLVATQAVRKASLLTKRIQSEV-ISHKDSTTITKND-NSPVTTGDYAAQTIII   56
2hhma.pdb               1  ---WQECMDYAVTLARQAGEVVCEAIKNEM------NVMLKSSPVDLVTATDQKVEKMLI   51
                                  l  a    rkA                              tt dq       

1inp.pdb               33  ---------IEEKKE--GEKNKKFAVDFKTLADVLVQEVIKE-NMENKFPGLGKKIFGEE   80
1qgxa.pdb              57  NAIKSNFPDDKVVGEESSSG----LSDAFVSGILNEIKANDE-VYNKNYKK--DD-FLFT  108
2hhma.pdb              52  SSIKEKYPSHSFIGEES---------------------VAAGE-----------------   73
                                        gE                       v  e                  

1inp.pdb               81  SNELTNDLGEKIIM-RLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSV  139
1qgxa.pdb             109  NDQ-----------FPLKSLE-DVRQIIDFGN--------------Y-EGGRK-------  134
2hhma.pdb              74  -------------------------------K--------------S-I-LTD-------   79
                                                                                       

1inp.pdb              140  EINIPQDILGIWVDPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMG  199
1qgxa.pdb             135  -------GRFWCLDPIDGTKGFLRG--------------E-QFAVCLALIV--DGVVQLG  170
2hhma.pdb              80  -------NPTWIIDPIDGTTNFVHR-------------FP-FVAVSIGFAV--NKKIEFG  116
                                     w  DPIDgT  f  g                 vaV ig  v   gv   G

1inp.pdb              200  VINQPFVSQDLH---TRR-------WKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQG  249
1qgxa.pdb             171  CIGCPNLV----LSSYGAQDLKGHESFGYIFRAVR-GLGAFYS--PSSDA----------  213
2hhma.pdb             117  VVYSCVE--------------------GKMYTARK-GKGAFCN-----------------  138
                           vi  p                      G  y a   g gaf s                 

1inp.pdb              250  TQNP--------SSEGSCRFSVVISTSEK-ETIKG----A----------LSHVC-GERI  285
1qgxa.pdb             214  ----ESWTKIHVRHLKDTK-DMITLEGVE-K---------GHSSHDEQTAIKNKLNISK-  257
2hhma.pdb             139  ------GQKLQVSQQEDIT-KSLLVTELGSSRTPETVRM----VLSNMEKLFCIP-VHGI  186
                                       s   d        t                        l         

1inp.pdb              286  FRAAGAGYKSLCVILGLADIYIFSED-----TTFKWDSCAAHAILRAMGGGMVDLKECLE  340
1qgxa.pdb             258  SLHLDSQAKYCLLALGLADVYLRLP-IKLSYQEKIWDHAAGNVIVHEAGGIHTDAMED--  314
2hhma.pdb             187  RSVGTAAVNMCLVATGGADAYYEM-------GIHCWDVAGAGIIVTEAGGVLMDVTG---  236
                                a  k clvalGlAD Y              WD aaa  Iv eaGG   D  e   

1inp.pdb              341  RNPDTGLDLPQLVYHVGNEGAAGVDQWANK-GGL-IAYRSEKQLETFLSR-------L--  389
1qgxa.pdb             315  ---------VPLDFGNG---------RTLATKGVIASSGPRELHDLVVSTS------C--  348
2hhma.pdb             237  ---------GPFD---------------LMSRRV-IAANNRILAERIAKEIQVIPLQRDD  271
                                     pld               l   gv ia   r l e   s           

1inp.pdb              390  -LQHLAPVATHT  400
1qgxa.pdb             349  -DVIQSR-----  354
2hhma.pdb             272  E-----------  272
                                       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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