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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 22:27:22 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/kunitz.html
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#====================================
# Aligned_structures: 10
#   1: 1aapa.pdb
#   2: 1bf0.pdb
#   3: 1dem.pdb
#   4: 1dtk.pdb
#   5: 1dtx.pdb
#   6: 1knt.pdb
#   7: 1shp.pdb
#   8: 1tap.pdb
#   9: 1tfxc.pdb
#  10: 5pti.pdb
#
# Length:         68
# Identity:        4/ 68 (  5.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     11/ 68 ( 16.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           16/ 68 ( 23.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1aapa.pdb               1  ----VREVCSEQAETGPCR----A-MISRWYFDVTEGKCAPFFYGGCGGNR-NNFDTEEY   50
1bf0.pdb                1  WQ--PPWYCKEPVRIGSCK----K-QFSSFYFKWTAKKCLPFLFSGCGGNA-NRFQTIGE   52
1dem.pdb                1  QP--LRKLCILHRNPGRCY----Q-KIPAFYYNQKKKQCEGFTWSGCGGNS-NRFKTIEE   52
1dtk.pdb                1  ----AAKYCKLPLRIGPCK----R-KIPSFYYKWKAKQCLPFDYSGCGGNA-NRFKTIEE   50
1dtx.pdb                1  --P-RRKLCILHRNPGRCY----D-KIPAFYYNQKKKQCERFDWSGCGGNS-NRFKTIEE   51
1knt.pdb                1  -----TDICKLPKDEGTCR----D-FILKWYYDPNTKSCARFWYGGCGGNE-NKFGSQKE   49
1shp.pdb                1  ------SICSEPKKVGRCK----G-YFPRFYFDSETGKCTPFIYGGCGGNG-NNFETLHQ   48
1tap.pdb                1  -Y-N---RLCIKPRDWIDECDSNEGGERAYFRNG-KGGCDSFWICPEDHTGADYYSSYRD   54
1tfxc.pdb               1  ----KPDFCFLEEDPGICR----G-YITRYFYNNQTKQCERFKYGGCLGNM-NNFETLEE   50
5pti.pdb                1  ----RPDFCLEPPYTGPCK----A-RIIRYFYNAKAGLCQTFVYGGCRAKR-NNFKSAED   50
                                   c      g c                    C  F   gc     n f     

1aapa.pdb              51  CMAVCG--   56
1bf0.pdb               53  CRKKCLGK   60
1dem.pdb               53  CRRTCIRK   60
1dtk.pdb               51  CRRTCVG-   57
1dtx.pdb               52  CRRTCIG-   58
1knt.pdb               50  CEKVCA--   55
1shp.pdb               49  CRAICRA-   55
1tap.pdb               55  CFNACI--   60
1tfxc.pdb              51  CKNICEDG   58
5pti.pdb               51  CMRTCGGA   58
                           C   C   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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