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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 22:30:36 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/phosfruc.html
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#====================================
# Aligned_structures: 2
#   1: 1pfka.pdb
#   2: 4pfk.pdb
#
# Length:        320
# Identity:      173/320 ( 54.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    173/320 ( 54.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            1/320 (  0.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1pfka.pdb               1  MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSD   60
4pfk.pdb                1  -MKRIGVLTSGGDSPGMNAAIRSVVRKAIYHGVEVYGVYHGYAGLIAGNIKKLEVGDVGD   59
                             K IGVLTSGGD PGMNAAIR VVR A   G EV G Y GY GL       L    V D

1pfka.pdb              61  MINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPC  120
4pfk.pdb               60  IIHRGGTILYTARCPEFKTEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFPC  119
                            I RGGT L  AR PEF  E      IE LKK GI  LVVIGGDGSY GA  LTE GFPC

1pfka.pdb             121  IGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLA  180
4pfk.pdb              120  VGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKIRDTATSHERTYVIEVMGRHAGDIALW  179
                            G PGTIDNDI GTD TIGF TAL TV  AID  RDT  SH R  V EVMGR  GD  L 

1pfka.pdb             181  AAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETG  240
4pfk.pdb              180  SGLAGGAETILIPEADYDMNDVIARLKRGHERGKKHSIIIVAEGVGSGVDFGRQIQEATG  239
                              AGG E    PE      D     K G   GKKH I    E           I   TG

1pfka.pdb             241  RETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDA  300
4pfk.pdb              240  FETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNNQLVDHDIAEA  299
                            ETR TVLGH QRGGSP   DR LASR GA A  LLL G GGRCVGIQN QLV HDI  A

1pfka.pdb             301  IENMKRPFKGDWLDCAKKLY  320
4pfk.pdb              300  LANKHTIDQRMYALSKELSI  319
                             N                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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